FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004722431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004722431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21322448
Sequences flagged as poor quality0
Sequence length95
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCTA34150.039.221014
TCCGATC44850.030.75682
TTCCGAT51100.027.5179621
CCGATCT54350.025.380733
GATCTAC74200.018.9507395
ATCTACT108950.012.7839526
TCTACTC113550.012.3052537
CTACTCA128350.011.1636968
CTTCCGA65350.09.6009782
TACTCAC166150.09.1069
TCTTCCG86400.07.8285251
TAGATCG16000.06.118717788-89
AGATCGG39200.05.959789888-89
Produced by FastQC (version 0.11.5)