Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004722446 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20842852 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCCGATC | 3725 | 0.0 | 28.323095 | 2 |
CCGATCT | 4330 | 0.0 | 24.803898 | 3 |
TTCCGAT | 4370 | 0.0 | 24.582289 | 1 |
TGACACG | 5095 | 0.0 | 21.349386 | 9 |
CGATCTG | 5160 | 0.0 | 20.533937 | 4 |
ATCTGAC | 12010 | 0.0 | 9.452709 | 6 |
CGATTCG | 785 | 5.138627E-7 | 9.076552 | 7 |
GATCTGA | 13600 | 0.0 | 8.698328 | 5 |
CTGACAC | 16055 | 0.0 | 7.4852877 | 8 |
TCTGACA | 18340 | 0.0 | 6.423203 | 7 |
CGTGTCA | 6775 | 0.0 | 6.1015043 | 94-95 |