FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004722446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004722446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20842852
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC37250.028.3230952
CCGATCT43300.024.8038983
TTCCGAT43700.024.5822891
TGACACG50950.021.3493869
CGATCTG51600.020.5339374
ATCTGAC120100.09.4527096
CGATTCG7855.138627E-79.0765527
GATCTGA136000.08.6983285
CTGACAC160550.07.48528778
TCTGACA183400.06.4232037
CGTGTCA67750.06.101504394-95