FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004722685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004722685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19854335
Sequences flagged as poor quality0
Sequence length95
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC38100.030.132795
TTCCGAT43400.026.658044
CCGATCT44400.025.6567466
CGATCTA15800.019.4328567
CTTCCGA63200.018.8695833
TCTTCCG89700.013.4437822
CGATCTT34950.07.8938547
CGATCTG38400.07.76404767
CGATCTC53850.06.61072167
GATCGGA31050.05.660844388-89
AGATCGG38150.05.19052388-89
TTTGGCG36300.05.14857779
Produced by FastQC (version 0.11.5)