FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004722711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004722711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21812211
Sequences flagged as poor quality0
Sequence length95
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC58850.051.341652
TTCCGAT67150.045.260691
CCGATCT70550.043.142533
CGATCTC98100.031.1627834
GATCTCT166800.018.4878185
ATCTCTT240100.013.3255536
TCTTGGT234200.013.2622449
CTCTTGG248000.012.7754698
TCTCTTG254700.012.404467
CTTCCGA58450.06.47114132
GATCGGA33400.06.328396388-89
AGATCGG43800.05.84171388-89
Produced by FastQC (version 0.11.5)