FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004722768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004722768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19959465
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC40000.017.5718232
AACCGCT37750.015.5997114
TTCCGAT48000.015.1379641
TGAACCG39650.014.6127432
GAACCGC42800.014.4248533
CCGATCT49900.014.3710413
ACCGCTC42300.014.1462745
CGATCTC67950.010.9729154
CGCTCTT56800.010.7858757
CCGCTCT76500.08.1324566
CGATCTA15300.07.76001648
CTTCCGA64500.07.2156964
CTGACAT165450.06.31499771
GATCTCT130700.06.2861155
GATCGGA37250.05.992730694-95
CTGACAC154100.05.63982631
CTGACAA146050.05.5604741
TCTTCCG87700.05.5234753
Produced by FastQC (version 0.11.5)