FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004722837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004722837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23759290
Sequences flagged as poor quality0
Sequence length95
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC37950.023.5691976
CCGATCT45000.020.1733557
TTCCGAT47800.018.7123665
CGATCTA14900.017.9194458
CTTCCGA65050.014.1606624
TCTTCCG93300.010.1591973
CGATCTG45950.09.9749844
TGACACG44650.09.9663549
CGATCTT39200.06.4706578
GATCGGA30150.06.272829588-89
CGCCGTT18651.1003067E-85.9651422
CGATCTC60100.05.9234558
ACGCGAA9500.00700900475.6210239
CGACCGA9658.179595E-75.3031750-51
ACGCCGT22104.3262844E-75.03394271
Produced by FastQC (version 0.11.5)