Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004723122 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 73461900 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 384169 | 0.5229499917644385 | Illumina Single End PCR Primer 1 (100% over 50bp) |
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 271542 | 0.3696365054538475 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGAT | 163833 | 0.2230176458817428 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 118347 | 0.16109983542489373 | Clontech SMART CDS Primer II A (100% over 26bp) |