FastQCFastQC Report
Thu 12 May 2022
EGAF00004723317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004723317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40183295
Sequences flagged as poor quality0
Sequence length100
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGGTATACGAGT611210.152105495579693No Hit
TGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGCTAGG522640.1300639979872233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)