FastQCFastQC Report
Fri 1 Jul 2022
EGAF00004723353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004723353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27389305
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGCTAGG602820.22009320791454914No Hit
CGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGGTATACGAGT568330.20750070145993116No Hit
CCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCGCGCTCGGTCG460750.16822259637475284No Hit
GTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCA292600.10683001996582243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)