EGAF00004723444 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004723444
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	37764972
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	239590	0.6344238782965336	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	169281	0.4482487104717037	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	77776	0.20594745840139903	No Hit
GGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAA	63593	0.1683914925185169	No Hit
CCCGTGTGGTTGGTGCGCGGACACGCACTGCCTGCGTAACTAGAGGGAGC	53586	0.14189339263908365	No Hit
GCCCCGTGTGGTTGGTGCGCGGACACGCACTGCCTGCGTAACTAGAGGGA	41897	0.11094143006381682	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	40141	0.10629161859301789	No Hit
CTCGTATACCCTTGACCGAAGACCGGTCCTCCTCTATCGGGGATGGTCGT	39924	0.10571701205021415	No Hit
GGCGTACGGAAGACCCGCTCCCCGGCGCCGCTCGTGGGGGGCCCAAGTCC	39701	0.1051265177688997	No Hit
CTCATTTGGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTC	39100	0.10353509596141101	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTACG	7670	54.11907	2
CGTACGG	7770	53.523922	3
GGCGTAC	8995	47.203384	1
ACCGCGT	15735	46.55829	6
AGACCGC	16530	44.317978	4
CCGCGTT	16735	43.69196	7
ATCGGAA	20435	42.289803	94
TCGGAAG	17965	42.271015	94
GTACGGA	10120	41.000286	4
TACGGAA	10825	38.37342	5
CAGACCG	19485	37.912098	3
GACCGCG	20850	35.1355	5
GCGTTCT	21115	34.80678	9
CGCGTTC	21150	34.726963	8
GATCGGA	28835	31.045853	94
GCCGGCT	24495	29.601727	94
TATACCC	79600	28.549715	94
AATACGG	16865	27.426395	32-33
TACGGAG	17355	26.66394	34-35
AGATCGG	41455	25.494183	94