Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004723528 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36269542 |
Total Bases | 3.6 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT | 188052 | 0.5184846282315889 | No Hit |
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC | 157193 | 0.43340221941594964 | No Hit |
CCCCGAGCCACCTTCCCCGCCGGGCCTTCCCAGCCGTCCCGGAGCCGGTC | 81550 | 0.2248443060019892 | No Hit |
GGCGTACGGAAGACCCGCTCCCCGGCGCCGCTCGTGGGGGGCCCAAGTCC | 66169 | 0.18243682261000152 | No Hit |
GGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAA | 57023 | 0.1572200718718753 | No Hit |
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA | 44559 | 0.12285514937023466 | No Hit |
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT | 40188 | 0.11080371513927582 | No Hit |
CCCGTCCCGGGGGTTGGCCGCGCGGGCCCCGGTGGGGCGGCCACCCGGGG | 39390 | 0.10860352193032931 | No Hit |
CGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAGGGACGCA | 36802 | 0.10146805824016196 | No Hit |