EGAF00004723736 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004723736
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	37135524
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	127547	0.34346357950947454	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	112542	0.3030575251880113	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	95592	0.25741389834703826	No Hit
GGCGTACGGAAGACCCGCTCCCCGGCGCCGCTCGTGGGGGGCCCAAGTCC	80506	0.2167897240389014	No Hit
CCCGTCCCGGGGGTTGGCCGCGCGGGCCCCGGTGGGGCGGCCACCCGGGG	61430	0.16542112075757973	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	49822	0.1341626416797027	No Hit
GGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAA	45904	0.12361209713911672	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	44347	0.11941934628416716	No Hit
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC	42511	0.11447529325289715	No Hit
CCCGGGGGTTGGCCGCGCGGGCCCCGGTGGGGCGGCCACCCGGGGTCCCG	41669	0.11220792252722757	No Hit
CCGGGGGTTGGCCGCGCGGGCCCCGGTGGGGCGGCCACCCGGGGTCCCGG	39317	0.105874364395666	No Hit
CCCGTGTGGTTGGTGCGCGGACACGCACTGCCTGCGTAACTAGAGGGAGC	38600	0.10394359858770272	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGCGTAC	13730	57.836967	1
CGTACGG	13760	57.14821	3
GCGTACG	13795	56.874462	2
TCGGAAG	16900	53.80235	94
GTACGGA	17600	44.893158	4
ACCGCGT	25250	42.266075	6
TACGGAA	18720	42.23235	5
ATCGGAA	22965	42.130524	94
CCGCGTT	26230	40.651096	7
AGACCGC	26370	40.40792	4
GCCGGCT	28145	37.181416	94
CCCGTTT	22785	36.49375	1
GCGTTCT	29490	36.257103	9
CAGACCG	29675	36.176826	3
CCAACGA	23710	35.085545	8
CGCGTTC	31390	34.07748	8
CAACGAA	25185	32.900074	9
GATCGGA	33380	32.673508	94
GACCGCG	33490	31.873306	5
TCCAACG	26730	31.360275	7