FastQCFastQC Report
Thu 12 May 2022
EGAF00004723809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004723809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32437009
Sequences flagged as poor quality0
Sequence length100
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGCTAGG1125330.34692779472977914No Hit
CGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGGTATACGAGT645390.19896717357633067No Hit
CCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCGCGCTCGGTCG606260.18690379251675146No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA586150.1807040840294492No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)