FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004723811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004723811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20539349
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGCTAGG330300.1608132760196051No Hit
CTTCGGTCAAGGGTATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAA230100.11202886712719085No Hit
CGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGGTATACGAGT214910.10463330653761227No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)