EGAF00004724442 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004724442
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	31742081
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	1123383	3.53909688529873	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	126465	0.3984143320660041	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	92262	0.290661472384246	No Hit
GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA	41192	0.1297709498000462	No Hit
GAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACTA	33330	0.10500256741201057	No Hit
GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG	31931	0.10059516891787908	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	137815	64.779	1
AGCAGTG	147660	60.31025	2
ATCAACG	164530	54.50125	11
GTATCAA	164285	54.32074	9
TCAACGC	166375	53.976814	12
ACGCAGA	166040	53.823227	15
AACGCAG	166585	53.81715	14
GAGTACT	161685	53.602116	20
GGTATCA	166855	53.456818	8
AGAGTAC	163200	53.42114	19
GTGGTAT	165820	53.415127	6
TGGTATC	165935	53.40129	7
TATCAAC	167190	53.383163	10
AGTGGTA	166080	53.3705	5
CGCAGAG	167345	53.319927	16
CAACGCA	168430	53.310677	13
CAGTGGT	167290	53.12451	4
GTACTTT	163980	52.69701	22
CAGAGTA	166405	52.640182	18
AGTACTT	166310	51.99691	21