FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004724502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004724502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2056913
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGT26890.13072988502673666No Hit
GGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCTTTCCCTT26020.12650024575662655No Hit
GCTTTGGCTCTCCTTGCAAAGTTATTTCTAGTTAATTCATTATGCAGAAG25140.12222198994318184No Hit
GTTTCAATTTCTATCGCCTATACTTTATTTGGGTAAATGGTTTGGCTAAG23580.11463780918298441No Hit
GGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCTTTCCC21870.10632438027276798No Hit
CCTTGCTATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTAC21690.10544928249274521No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)