EGAF00004724504 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004724504
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13987805
Sequences flagged as poor quality	0
Sequence length	89
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTATG	180728	1.2920397446204033	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGCTTC	129941	0.9289591898085511	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCTGGCTTT	128197	0.9164911864298938	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	116094	0.8299658166524341	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	89342	0.6387135079449564	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCTGGAGAG	76520	0.5470479464076029	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	38197	0.27307358087991646	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	36374	0.2600407998252764	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	28499	0.20374175933965336	No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTATGA	26629	0.19037297131322606	No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGCTTCA	20144	0.14401115829109715	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATAGGGCTGG	20027	0.14317471540388219	No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCTGGCTTTA	18954	0.13550374772882523	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTCTCT	72465	80.837715	1
GTCTCTC	82860	70.70146	2
CTCAGCT	88980	65.68642	6
TCTCTCA	90540	64.73176	3
TCTCAGC	91095	64.28294	5
CAGCTGG	91415	64.03183	8
TCAGCTG	92840	62.977272	7
CTCTCAG	94740	61.90171	4
AGCTGGT	98035	59.716423	9
ATACGGC	850	54.184494	5
TGATACG	925	50.239544	3
TCTGATG	24335	44.85761	1
CTGATGG	32010	42.5077	1
GGCTCAA	32940	41.468327	6
GCTCAAA	33025	41.22309	7
GATACGG	1145	40.94906	4
TGATGGC	33290	40.91914	2
TCAAACA	33905	40.324627	9
CTCAAAC	33865	40.28649	8
TGGCTCA	33990	40.162033	5