EGAF00004724506 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004724506
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14595252
Sequences flagged as poor quality	0
Sequence length	89
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTATG	192793	1.320929573535284	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGCTTC	138542	0.9492265018788302	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCTGGCTTT	138347	0.9478904509493908	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	123110	0.8434934867859767	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	94026	0.6442232035459202	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCTGGAGAG	83734	0.5737071206444397	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	40879	0.280084235613061	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	38752	0.2655110031673314	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	30673	0.2101573854291793	No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTATGA	28438	0.1948441863148372	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATAGGGCTGG	21307	0.14598583155672817	No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGCTTCA	20708	0.14188175716321993	No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCTGGCTTTA	20408	0.13982629419485187	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTCTCT	77325	80.819214	1
GTCTCTC	88040	70.99229	2
CTCAGCT	94525	66.11278	6
TCTCTCA	96450	64.88768	3
TCTCAGC	96555	64.76985	5
CAGCTGG	96955	64.47717	8
TCAGCTG	98520	63.40662	7
CTCTCAG	100410	62.349285	4
AGCTGGT	103510	60.422073	9
TGATACG	875	50.740234	3
ATACGGC	900	48.408714	5
CTGATGG	33100	43.778168	1
TCTGATG	25400	42.644054	1
GGCTCAA	34355	42.1878	6
TGATGGC	34485	41.99281	2
GCTCAAA	34620	41.888844	7
TGGCTCA	35450	40.907948	5
TCAAACA	35535	40.903652	9
CTCAAAC	35500	40.873848	8
GATACGG	1140	38.581383	4