FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004724529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004724529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25259868
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACTCG171000.07.123911494-95
CTCGTAT44400.06.36445694-95
ACCTAAC244900.06.157185694-95
TATGCCG34800.06.07319956-57
CGTATGC33500.06.0253354-55
CCTAACT245500.05.99704794-95
CTAACTC239050.05.900583794-95
TCGTATG36900.05.79179894-95
CACCTAA289150.05.39559694-95
Produced by FastQC (version 0.11.5)