FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004724531

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004724531
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31756015
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTAGT230400.06.864198794-95
CTCGTAT46400.06.85780294-95
CGTAGTC213100.06.74170994-95
CGTATGC35800.06.699408594-95
TCGTATG37800.06.65904894-95
ACTCGTA254350.06.55395594-95
TCACTCG322450.06.193436694-95
CACTCGT298450.06.007219394-95
CTCGTAG273900.05.94744194-95
TCTCGTA66350.05.833709294-95
ATCTCGT80400.05.257291394-95
Produced by FastQC (version 0.11.5)