FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004725226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004725226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63065532
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCATGTACTCTGCGTTGATACCACT1273860.20198989203801532Clontech SMART CDS Primer II A (95% over 22bp)
TCCCATGTACTCTGCGTTGATACCAC882660.1399591777010618Clontech SMART CDS Primer II A (95% over 21bp)
CCCCATGTACTCTGCGTTGATACCAC720730.11428271151347774Clontech SMART CDS Primer II A (95% over 21bp)
CATCCCATGTACTCTGCGTTGATACC641270.10168311907683583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)