FastQCFastQC Report
Tue 5 Jul 2022
EGAF00004823512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004823512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478881995
Sequences flagged as poor quality0
Sequence length35-150
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN26769230.5589942883528123No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10033590.2095211368303793No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)