FastQCFastQC Report
Wed 22 May 2024
EGAF00004824097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004824097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82969660
Total Bases10.4 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1978250.23843052990695635No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT925890.11159380428942339No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)