FastQCFastQC Report
Fri 24 May 2024
EGAF00004824099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004824099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69794595
Total Bases8.7 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1848130.26479557621904676No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT869250.12454402808698868No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)