FastQCFastQC Report
Sat 25 May 2024
EGAF00004824101

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004824101
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81384925
Total Bases10.2 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1949170.23950012855574912No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT886380.10891206203114397No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)