FastQCFastQC Report
Wed 8 May 2024
EGAF00004824108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004824108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16117298
Total Bases499.6 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAATACCTGCCACCCCACTCTTAATCAG208950.12964331862573986No Hit
CCCCTATACCTTCTGCATAATGAATTAACTA168740.10469496810197343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)