FastQCFastQC Report
Wed 8 May 2024
EGAF00004824120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004824120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14075040
Total Bases436.3 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAATACCTGCCACCCCACTCTTAATCAG169370.12033358342143255No Hit
GCCATATATTGCATGGGGGTACCCCAATCTG152630.10844018915754414No Hit
GACTTAAACAGCTTAAAGTTTAGTTTAAAAG146870.10434783844308791No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)