EGAF00004824548 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004824548
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25611072
Sequences flagged as poor quality	0
Sequence length	64
%GC	25

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1125050	4.3928266649674015	No Hit
GGTTGCCAGATGTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	136721	0.5338355223865678	No Hit
GGTTGCCAGATGTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	58794	0.22956477573449485	No Hit
GGTTGCCAGATGTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	56200	0.2194363437813146	No Hit
AAGTATCGTTTCGCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	40625	0.15862280188818337	No Hit
AAGTATCGTTTCGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	39174	0.1529572834748971	No Hit
AAGTATCGTTTCGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	35484	0.1385494523618535	No Hit
TGTCTTTCCTGCCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32425	0.12660539941475313	No Hit
TGTCTTTCCTGCCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	28359	0.11072945326146443	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTCTTT	644090	57.988106	1
GTCTTTC	644000	57.93535	2
GGTTGCC	1260455	57.908573	1
TCTTTCC	644300	57.90722	3
CTTTCCT	643905	57.88104	4
GTTGCCA	1263320	57.880978	2
GCCAGAT	1266965	57.85324	5
TTGCCAG	1267990	57.846035	3
AGTATCG	469335	57.829536	2
TTTCCTG	641190	57.827404	5
GTATCGT	469055	57.82486	3
AAGTATC	469900	57.81574	1
CCAGATG	1268620	57.804058	6
CAGATGT	1241865	57.78939	7
AGATGTC	1240535	57.77513	8
TTCCTGC	641095	57.772415	6
TCCTGCC	639005	57.76442	7
TATCGTT	469435	57.76199	4
GATGTCA	1213375	57.746727	9
TCGTTTC	467930	57.73644	6