Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004824551 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25611072 |
Sequences flagged as poor quality | 0 |
Sequence length | 28 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCCAGAT | 68840 | 0.0 | 21.175665 | 2 |
CCAGATC | 69565 | 0.0 | 21.112936 | 3 |
GCCCAGA | 71190 | 0.0 | 21.064404 | 1 |
CAGATCC | 69435 | 0.0 | 20.966784 | 4 |
TCCAGTG | 70990 | 0.0 | 20.702753 | 8 |
CCAGTGC | 70775 | 0.0 | 20.684824 | 9 |
GATCCAG | 70930 | 0.0 | 20.534168 | 6 |
CTGCGAC | 18510 | 0.0 | 20.448524 | 10 |
ATCCAGT | 71820 | 0.0 | 20.41755 | 7 |
ACTGCGA | 18555 | 0.0 | 20.410908 | 9 |
GCCGTGT | 14975 | 0.0 | 20.40571 | 5 |
CAGTGCG | 71835 | 0.0 | 20.361103 | 10 |
AACGTAG | 25775 | 0.0 | 20.331028 | 5 |
AGATCCA | 72050 | 0.0 | 20.303518 | 5 |
TGAGCCG | 15445 | 0.0 | 20.302607 | 2 |
CACTGCG | 19790 | 0.0 | 20.287725 | 8 |
AGCCGTG | 15245 | 0.0 | 20.239124 | 4 |
GCTCGGC | 21345 | 0.0 | 20.180542 | 9 |
AGCTCGG | 21420 | 0.0 | 20.150965 | 8 |
GCACTGC | 19490 | 0.0 | 20.097704 | 7 |