FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004827408

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004827408
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19404203
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATTGGG67450.017.6938369
AGATTGG68050.017.521718
ATTGGGC69050.017.25189410
AAAGATT70050.016.502676
GCTATCG44650.016.1107984
ACCCAAA109950.016.037721
GCCCGAA27600.016.0321711
AAGATTG77100.015.9067037
CCCGGAA26550.015.8370481
GGGACCT28450.015.5918671
CACGACG37100.015.5061188
TTGCTGC42700.015.4667391
AATCCAA65250.015.3735446
TCGCCGA34200.015.2771678
GTACTTG53850.015.2584458
CCGGACA38000.015.236231
GGGCTAC33250.015.1948491
TTTCAAA79450.015.1703882
TCCAAGC83150.015.054128
TTGATGG30650.015.0113981
Produced by FastQC (version 0.11.5)