EGAF00004827409 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827409
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19404203
Sequences flagged as poor quality	0
Sequence length	64
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3435788	17.706411337791096	No Hit
TGATGGCCTATTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	79732	0.4109006693034494	No Hit
TGATGGCCTATTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	79459	0.40949375761529605	No Hit
TGATGGCCTATTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	79077	0.4075251119564148	No Hit
TTCCGCCTCTCTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	77602	0.399923666022253	No Hit
TTCCGCCTCTCTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	70998	0.3658898023278771	No Hit
TTCCGCCTCTCTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	58787	0.30296013703835195	No Hit
GTCAACTCTTTAGCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	28874	0.14880281349355085	No Hit
GTCAACTCTTTAGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	22717	0.11707257443142602	No Hit
GTCAACTCTTTAGCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	21263	0.10957935247327602	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCAACT	263995	58.02185	1
TTCCGCC	621165	58.01283	1
TGATGGC	628215	57.993504	1
TCAACTC	267140	57.96115	2
CAACTCT	267195	57.901283	3
GATGGCC	629260	57.888054	2
TCCGCCT	623035	57.83165	2
AACTCTT	267060	57.82086	4
ATGGCCT	628750	57.776978	3
CCGCCTC	622925	57.750202	3
TGGCCTA	628610	57.74874	4
ACTCTTT	266525	57.742165	5
CGCCTCT	621985	57.71625	4
GCCTCTC	621590	57.682945	5
CTTTAGC	263540	57.677944	8
GGCCTAT	623740	57.67147	5
GCCTATT	623415	57.60432	6
CCTCTCT	613110	57.588722	6
CCTATTG	623060	57.587784	7
CTCTCTT	608555	57.546078	7