EGAF00004827580 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827580
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12585762
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCA	45807	0.3639588925962528	No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	22880	0.18179272736922883	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	19901	0.15812312357408315	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	19261	0.15303801231899983	No Hit
CACTGACCTGGGACAGTGAATCGACAATGCCGTCTTCTGTCTCGTGGGGC	17593	0.13978494111043893	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTAAC	8275	56.130207	1
CGACCGT	2145	47.121475	1
AACACGT	10695	43.511772	5
TAACACG	10680	43.22319	4
ACGTGCG	10825	42.59028	8
ACACGTG	11275	41.26756	6
TCTAACA	11515	40.58169	2
GACCGTT	2565	39.222397	2
CGTGCGC	12190	37.8597	9
ACCGTTG	2710	36.95001	3
CTAACAC	13050	35.699932	3
GCGATTT	5970	33.929504	94
TCACCCG	6555	33.92288	3
CACGTGC	13850	33.5264	7
TCAGACG	6670	33.1973	2
ACCCGGC	7305	30.565096	5
CACCCGG	7565	29.640535	4
CCGTTGA	3615	28.088078	4
CAGACGT	7955	27.480017	3
CGTTGAC	3725	27.257113	5