EGAF00004827589 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827589
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11662274
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	15154	0.12994035297061277	No Hit
CTTGATTAATGAAAACATTCTTGGCAAATGCTTTCGCTCTGGTCCGTCTT	14671	0.12579879361434998	No Hit
CCCAAATCTTTAAACCGATGAGCAACCTCACTCTTGTGTGCATCTCGACG	14472	0.12409243686094154	No Hit
CTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAGGGTCT	13305	0.11408581208090293	No Hit
CCCGAAGTTACGGATCCGGCTTGCCGACTTCCCTTACCTACATTGTTCCA	13115	0.1124566272409652	No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGG	12289	0.10537396051576219	No Hit
CCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAA	12112	0.10385624621750442	No Hit
CTTCCGTACGCCACATGTCCCGCGCCCCGCCGCGGGGCGGGGATTCGGCG	11906	0.1020898668647298	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCCGTAT	1765	28.017998	1
TGTCGAG	1535	27.861876	5
TGTTACG	1300	27.475624	3
GTATCGA	1435	27.183386	4
ACGACTT	3240	26.601038	1
GTCGAGG	1840	23.754313	6
CGTACGC	4960	23.593643	5
GTTACGA	1540	23.193708	4
CCGTACG	5035	23.055515	4
GTTACGG	6525	22.832636	7
TTACGGA	6640	22.649532	8
TTACGAC	1560	22.595085	5
GTACGCC	5310	21.949997	6
AGTTACG	6765	21.883665	6
TACGCCA	5330	21.867634	7
CGCCCTT	1830	21.61826	1
TCCGTAC	5535	20.887901	3
GGTACGG	6895	20.790247	94
TACGGAT	7500	20.11505	9
TATCGAA	2075	19.478596	5