EGAF00004827674 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827674
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13819425
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	36217	0.26207313256521164	No Hit
CCTAGAGGCAGCTGCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTACT	25944	0.1877357415377268	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	25223	0.18251844776465012	No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT	18617	0.13471616944988665	No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA	16817	0.12169102549491025	No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT	16492	0.1193392633919284	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	15408	0.11149523225459815	No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT	15109	0.10933161111985484	No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT	14861	0.10753703573050254	No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA	14717	0.10649502421410442	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCGT	2240	62.673145	1
ACCGTTG	2880	48.293335	3
GACCGTT	3070	45.423027	2
CCGTTGA	3355	41.45598	4
CGCAAAA	6075	35.671783	1
ACATGCC	11265	32.912907	2
CACATGC	11840	31.87088	1
TAACCCC	6900	31.328808	9
CCTAGAG	9435	29.60916	1
CTAGAGG	10000	27.324408	2
TAGAGGC	10255	26.85035	3
TTAACCC	7955	26.641323	8
CGACCTA	1035	25.42352	4
CGTTGAC	5615	25.35564	5
TGCCTAT	15110	24.504366	5
CATGCCT	15280	24.355095	3
GCATTCG	2320	24.304197	3
AACCCAC	11480	24.271381	5
CATTCGG	2370	23.791449	4
TACTCTA	5325	23.386295	9