Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004827744 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12923677 |
Total Bases | 77.5 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCACG | 12696987 | 98.24593263975879 | No Hit |
ATCCCG | 26228 | 0.2029453382346216 | No Hit |
ATTACG | 25944 | 0.20074782122765836 | No Hit |
ATCACC | 23128 | 0.17895835682058597 | No Hit |
ATCACT | 20826 | 0.16114608868667948 | No Hit |
ATCACA | 19683 | 0.15230185650724634 | No Hit |
ATCATG | 18112 | 0.14014587334548828 | No Hit |
CTCACG | 15600 | 0.12070868066417939 | No Hit |
ATCAAG | 13043 | 0.10092328986556999 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)