EGAF00004827897 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827897
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2793069
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	4518	0.16175755056534585	No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	4108	0.14707835717628173	No Hit
CTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACTATTCCTC	3514	0.12581142821749122	No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA	3305	0.11832861988013903	No Hit
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT	3036	0.10869763690048474	No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATACCGCTCACACCT	3019	0.10808898741849915	No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT	2927	0.10479511963363598	No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT	2896	0.1036852294017799	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	2825	0.10114322274172247	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACCGT	250	0.0	60.809734	1
CGGCCCG	295	0.0	38.6551	8
CTACCGT	990	0.0	37.91011	1
CCGTATG	965	0.0	37.415314	4
GACCGTT	455	0.0	34.456066	2
CGTATGG	1100	0.0	32.82226	5
ACCGTAT	1110	0.0	32.527725	3
CCGTTGA	470	0.0	32.3456	4
ACCGTTG	475	0.0	32.005123	3
CACGCCG	225	0.0	31.671734	4
ACGCCGC	225	0.0	31.670599	5
CGCAAAA	1080	0.0	30.352081	1
TACACGC	240	0.0	29.692253	2
TTCCGCG	120	5.3785916E-6	27.71277	3
ACCCGGC	485	0.0	26.446585	5
GGTCGCG	145	7.885792E-7	26.210152	5
GTCGCGG	145	7.895669E-7	26.206398	6
GCTCGGA	805	0.0	25.970146	8
AGGCTCG	830	0.0	25.752522	6
TACCGTA	1430	0.0	25.581018	2