EGAF00004827913 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827913
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13047954
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA	35418	0.2714448564119708	No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG	23937	0.183454049577428	No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	23333	0.17882497133267025	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	18640	0.14285764649384877	No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT	17494	0.13407466028773554	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	16863	0.1292386530485929	No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT	15391	0.11795719083620314	No Hit
CATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTAT	13993	0.10724286734916447	No Hit
CACTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTA	13915	0.10664507247649707	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTGACT	10450	38.372593	1
GTAGGTC	4475	37.902702	2
AGTAGGT	5555	31.303434	1
CGACCGT	1615	31.183746	1
TTGACTA	12280	31.029228	2
GACTATT	13470	28.499598	4
TGACTAT	13740	27.835827	3
GGTCTAC	6580	26.281721	5
TAGGTCT	6650	26.006067	3
ATCACAT	9210	25.741621	1
AGGTCTA	6855	25.43628	4
TACTATA	6305	24.79167	4
CTATAAC	6375	24.214466	6
CGGCCCG	3510	23.682142	8
CTACCGT	4520	23.644716	8
ACCCGGC	3505	23.314104	5
ACTACCG	4675	23.164783	7
TCACATG	10325	23.053806	2
GACCGTT	2275	22.345873	2
ACCGTTG	2325	21.865318	3