EGAF00004827921 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827921
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13382176
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT	35107	0.26234149065144563	No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT	32160	0.24031966101775976	No Hit
CACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCT	30455	0.22757883321815525	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	25622	0.19146363042901246	No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	24423	0.18250395152477444	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	23909	0.17866302161920453	No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA	23815	0.1779605947493143	No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT	21147	0.1580236278464728	No Hit
CACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTT	20994	0.15688031602633234	No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATACCGCTCACACCT	18920	0.14138208913109498	No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA	17976	0.13432792992709108	No Hit
CGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCTCT	16907	0.1263396924386587	No Hit
CTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCTCTTTA	16315	0.12191589768360542	No Hit
CCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTT	15213	0.11368106352808392	No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC	14302	0.10687350099116914	No Hit
CAGGAAAGCTCCATGCACATAGCCCAGCAAAGAGCAACACAGAGCTGAAA	13688	0.10228530845805646	No Hit
CTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGC	13647	0.10197893078076391	No Hit
CAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCA	13646	0.10197145815448849	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCGT	2085	65.38725	1
ACCGTTG	2930	46.691967	3
GACCGTT	2955	46.136185	2
CGGCCCG	2590	44.39096	8
CCGTTGA	3180	43.61873	4
CGCAAAA	5060	42.808655	1
ACCCGGC	3190	36.48277	5
CCGTATG	4015	33.83746	4
CTACCGT	4165	33.53124	1
TAACCCC	6525	32.98781	9
CCGGCCC	3675	31.669813	7
CACCCGG	3685	31.582453	4
CGTATGG	4490	30.045843	5
ACCGTAT	4785	28.789448	3
TCACCCG	4285	28.268751	3
CACGCCG	795	28.08329	4
CCCGGCC	4425	26.72837	6
ACATGCC	9040	26.431198	2
CGTTGAC	5650	25.474554	5
ACGCCGC	1015	25.272028	5