EGAF00004827923 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827923
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13641937
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT	35507	0.2602782874602045	No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT	32896	0.24113877670011233	No Hit
CACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCT	30777	0.2256057919047713	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	25872	0.18965048731716033	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	24846	0.18212956121993526	No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	24546	0.17993046002191623	No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA	24074	0.17647054080369964	No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT	21461	0.157316369368954	No Hit
CACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTT	21391	0.1568032457560829	No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATACCGCTCACACCT	19498	0.14292691719658288	No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA	18149	0.133038292142824	No Hit
CGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCTCT	17354	0.1272106739680736	No Hit
CTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCTCTTTA	16612	0.12177156367163988	No Hit
CCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTT	15568	0.11411869150253369	No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC	14453	0.10594536538322966	No Hit
CAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCA	14014	0.10272734729679517	No Hit
CTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGC	13879	0.1017377517576866	No Hit
CAGGAAAGCTCCATGCACATAGCCCAGCAAAGAGCAACACAGAGCTGAAA	13671	0.10021304159372676	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCGT	2365	64.86615	1
ACCGTTG	3175	48.302742	3
GACCGTT	3175	48.302032	2
CGGCCCG	2755	45.341766	8
CCGTTGA	3440	44.4447	4
ACCCGGC	3210	39.93812	5
CGCAAAA	5355	39.379505	1
CCGTATG	4050	36.22647	4
CGTATGG	4275	34.43138	5
CTACCGT	4445	33.657787	1
CACCCGG	3805	33.56759	4
CCGGCCC	3880	32.435658	7
ACCGTAT	4655	32.23149	3
TAACCCC	6675	30.887701	9
CCCGGCC	4360	29.29594	6
TCACCCG	4510	29.056648	3
CGTTGAC	5900	27.201546	5
GCTCGGA	3720	27.195745	8
GTAGGTC	4305	26.469439	2
ACATGCC	9500	25.988808	2