EGAF00004827925 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827925
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12021145
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA	33937	0.2823108780403198	No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	21290	0.17710459361400266	No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG	20660	0.17186382827925295	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	19729	0.16411914172901168	No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT	15585	0.12964655197154681	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	15328	0.1275086524619743	No Hit
CATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTAT	15261	0.12695130122796122	No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT	14964	0.12448065471300777	No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA	14153	0.11773420917890934	No Hit
CACTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTA	12689	0.10555566878196711	No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG	12390	0.10306838491674461	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGGTC	4325	35.154514	2
GTTGACT	9440	35.031155	1
CGACCGT	1895	33.34722	1
AGTAGGT	5410	28.543243	1
TTGACTA	11570	27.88391	2
GACTATT	12365	26.129665	4
ACTACCG	4805	25.80129	7
CGCAAAA	3665	25.409687	1
TGACTAT	12920	25.190992	3
CTACCGT	4780	24.74407	8
TAGGTCT	6385	24.705544	3
CGGCCCG	3780	24.629976	8
AGGTCTA	6515	24.431461	4
GGTCTAC	6400	24.27543	5
ACCGTTG	2610	24.029827	3
CTATAAC	5460	23.489439	6
GACCGTT	2750	23.32482	2
TACTATA	5595	22.84395	4
ACCCGGC	4185	22.705635	5
ATCACAT	8600	22.48605	1