EGAF00004827929 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004827929
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12001689
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA	33929	0.28270187637756655	No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC	21073	0.17558361993882693	No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG	20369	0.16971777888928802	No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG	19681	0.16398525240905676	No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT	15271	0.12724042424362103	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	15084	0.12568231021483728	No Hit
CATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTAT	14869	0.123890895689765	No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT	14767	0.1230410153104284	No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA	13579	0.11314240853933141	No Hit
CACTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTA	12500	0.10415200727164318	No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG	12099	0.10081081087836886	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGGTC	4440	38.174767	2
GTTGACT	9985	38.03903	1
CGACCGT	1955	34.242058	1
AGTAGGT	5470	31.506983	1
TTGACTA	12215	29.928738	2
GACTATT	12865	28.897081	4
GGTCTAC	6095	28.043407	5
CTACCGT	4295	27.81291	8
ACTACCG	4485	27.16949	7
TGACTAT	13725	26.982628	3
AGGTCTA	6535	26.881788	4
TAGGTCT	6405	26.834372	3
GACCGTT	2580	26.315248	2
ACCGTTG	2530	26.272991	3
CGCAAAA	3855	25.001104	1
CTATAAC	5580	24.847103	6
ACCCGGC	3790	23.80216	5
ATCACAT	9020	23.26501	1
TACTATA	6170	23.162388	4
TCACATG	9495	21.901318	2