FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004827991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004827991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14158688
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT565530.3994226018681957No Hit
CGCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCT260750.18416254387412168No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC218700.15446346441139178No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG212000.1497313875409925No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA179710.12692560214618756No Hit
CCTAGAGGCAGCTGCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTACT175940.12426292605642555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)