EGAF00004828050 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828050
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16128025
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	101145	0.6271381647783905	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	47712	0.29583287476302894	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	34307	0.2127166841569256	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	33921	0.21032333469225153	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	31277	0.19392951089795557	No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC	23303	0.1444876232520721	No Hit
CTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTC	20079	0.12449757487355084	No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG	19366	0.12007669878983943	No Hit
CTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCGA	19218	0.11915904148214054	No Hit
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC	19133	0.11863200856893513	No Hit
CCCGCTTTGGGCTGCATTCCCAAGCAACCCGACTCCGGGAAGACCCGGGC	19047	0.11809877526851552	No Hit
CCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAGACCTC	17118	0.10613822833235936	No Hit
CTCGTGCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTG	16345	0.10134532901579704	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTACGA	1995	39.52755	1
CCCGTAT	8930	38.429565	1
GTATCGA	8535	37.961723	4
TATCGAA	9170	35.807014	5
TTACGAC	2205	34.52056	2
CGTATCG	12525	32.061367	3
ACCCGGG	67540	30.567308	145
CCGTATC	13040	30.353739	2
GAACTCT	71940	29.973555	9
TACGACT	2540	29.9644	3
TTGAACT	75845	28.842405	7
CTTGAAC	72435	28.819288	6
CCTCTTG	67830	28.265316	3
AACGGTT	26620	28.263668	6
GTCGGTA	2150	27.848028	1
TCTTGAA	73860	27.517433	5
CTCTTGA	73390	26.972843	4
ACGACTT	4435	26.67107	1
TCGGTAT	1880	26.606535	2
TGTTACG	2165	26.449604	3