EGAF00004828094 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828094
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21984060
Sequences flagged as poor quality	0
Sequence length	151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	111178	0.5057209632797581	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	41374	0.1881999958151497	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	40703	0.18514778434920576	No Hit
CCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAGACCTC	33969	0.15451649968204234	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	33283	0.15139605696127104	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	30608	0.1392281498503916	No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC	24960	0.11353680803272918	No Hit
CTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCGA	22626	0.10292002478159176	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGGG	68230	33.04189	145
ACGACTT	5225	32.9824	1
GAACTCT	73925	31.649416	9
CCTCTTG	67615	31.31401	3
AACGGTT	21535	31.100502	6
TTGAACT	78935	30.339663	7
CTTGAAC	76235	30.045055	6
CTTAACG	22780	29.846907	3
GTATCGA	6215	28.923698	4
GCCCTCT	61770	28.324732	1
TTAACGG	23985	28.286514	4
TCTTGAA	79855	28.074894	5
CTCTTGA	79250	27.557713	4
TAACGGT	24775	27.44287	5
CCCGTAT	7555	26.676645	1
TCTTAAC	26565	25.95191	2
CCCTCTT	73080	25.682194	2
ACGGTTT	28085	24.053698	7
GTCGGTA	2220	23.682968	1
TATCGAA	7840	23.298332	5