EGAF00004828130 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828130
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17684600
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	106833	0.6041018739468238	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	57264	0.32380715424719814	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	35595	0.20127681711771825	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	31941	0.18061477217466043	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	30499	0.1724607850898522	No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC	22707	0.12839985071757348	No Hit
CTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCGA	20886	0.11810275607025322	No Hit
CCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAGACCTC	19695	0.11136808296483947	No Hit
CTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTC	19355	0.10944550625968358	No Hit
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC	18297	0.10346289992422787	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGGG	64695	34.07885	145
GTATCGA	5045	33.90894	4
CTTAACG	28380	31.142288	3
AACGGTT	28470	30.933924	6
TTAACGG	28905	30.64514	4
TAACGGT	29535	30.137014	5
TTCGCGC	2565	29.954681	7
GAACTCT	76270	29.851107	9
CCCGTAT	6390	29.573538	1
CTCTTGA	72705	29.142578	4
TTGAACT	81090	28.586262	7
CTTGAAC	79110	28.293856	6
GCCCTCT	63595	28.040293	1
CCTCTTG	75605	27.52267	3
TCTTAAC	32630	27.255861	2
TCTTGAA	81615	26.81217	5
TATCGAA	6500	26.540092	5
CGTATCG	8360	26.451649	3
CCCTCTT	72735	25.950775	2
ACGGTTT	35270	25.05212	7