EGAF00004828132 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828132
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17850662
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	110987	0.6217528515188961	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	58736	0.3290410181986528	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	36334	0.20354427191551774	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	33042	0.18510237883614625	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	31056	0.1739767410306688	No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC	22646	0.12686364236799733	No Hit
CTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCGA	20895	0.11705448234917001	No Hit
CCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAGACCTC	19886	0.11140203091627639	No Hit
CTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTC	19694	0.11032644055441754	No Hit
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC	18117	0.10149203430102481	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGGG	65485	34.038857	145
TTCGCGC	2660	31.883879	7
GTATCGA	5260	31.697401	4
AACGGTT	28630	31.395493	6
CTTAACG	28850	30.98202	3
TTAACGG	29240	30.642391	4
TAACGGT	29940	30.046019	5
GAACTCT	77390	29.999294	9
CCCGTAT	6130	29.569351	1
CTCTTGA	73885	29.39457	4
TTGAACT	82755	28.590572	7
CTTGAAC	80805	28.518013	6
CCTCTTG	76735	27.916212	3
GCCCTCT	64980	27.782728	1
TCTTGAA	83065	27.183598	5
TCTTAAC	33435	27.147245	2
CCCTCTT	73585	26.060194	2
TATCGAA	6535	25.512274	5
CGTATCG	8045	25.320526	3
ACGGTTT	36075	24.976507	7