EGAF00004828140 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828140
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17046366
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	92566	0.5430248300429547	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	55665	0.3265505386895952	No Hit
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCT	36753	0.2156060711121655	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	30418	0.17844272497727667	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	30267	0.17755690567713964	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	27957	0.16400563029093707	No Hit
CTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACTTT	22664	0.132955023962292	No Hit
CAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGG	22241	0.13047355665131208	No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC	21923	0.12860805640334133	No Hit
CCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAG	19721	0.1156903471390911	No Hit
CCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAGACCTC	18180	0.10665029719530837	No Hit
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC	18080	0.10606366189720437	No Hit
CTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTC	17952	0.10531276871563124	No Hit
CTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCGA	17208	0.10094820209773743	No Hit
GGCCTCACTAAACCATCCAATCGGTAGTAGCGACGGGCGGTGTGTACAAA	17140	0.10054929009502671	No Hit
CCCGAAGTTACGGATCCGGCTTGCCGACTTCCCTTACCTACATTGTTCCA	17077	0.10017970985722119	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGACTT	10460	53.788685	1
TGTTACG	3440	39.405853	3
TTCGCGC	5140	37.37134	7
GTTACGA	3730	36.924294	4
TTACGAC	3740	36.436966	5
ACCCGGG	63650	30.450567	145
TGTCGAG	3140	29.317709	5
CCCGTAT	4395	29.147205	1
ACTTTTA	22185	29.112915	4
TACGACT	4710	29.08686	6
GACTTTT	22210	28.689165	3
CTTAACG	30530	28.658804	3
TTAACGG	30780	28.519567	4
TACTTCC	23535	28.395681	9
GTATCGA	3575	28.386993	4
CTTTTAC	23705	28.101631	5
TAACGGT	31605	27.866116	5
TTACTTC	24145	27.52819	8
AACGGTT	32085	27.291088	6
GAACTCT	76765	26.645834	9