EGAF00004828152 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828152
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18902324
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	66901	0.3539300246890276	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	37075	0.19613990322036595	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	30979	0.16388990052228497	No Hit
CTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTA	29024	0.15354725694046933	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	26457	0.13996691623738966	No Hit
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT	24225	0.1281588443833679	No Hit
CTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTC	22969	0.121514158788094	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	22813	0.12068886344345806	No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC	21676	0.11467373006620774	No Hit
CTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCGA	21144	0.11185926132680829	No Hit
GTGATGTTATAAGCCTAAGGCAGCTTGACTTGCAGCAACAAGTTTTTTAC	19753	0.10450037783713792	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCCGTCG	7075	38.295605	1
ACGACTT	4700	37.23692	1
GTATCGA	6140	36.230125	4
GTTACGA	1725	33.536034	1
CCCGTAT	6990	32.89472	1
TATCGAA	6965	32.66313	5
CGTATCG	12095	32.170765	3
CCGTATC	12515	30.37735	2
TGTCGAG	2855	29.183748	5
TTACGAC	2025	29.020803	2
CGGCATG	10315	25.777817	6
GTCGAGG	3590	24.621511	6
GCCGTAT	7110	23.379217	1
TACGACT	2555	22.687784	3
TCGGTAT	1605	22.60187	2
GTCGGTA	1630	22.462397	1
GTATCGT	8210	21.182049	4
CCGTCGG	12830	21.036123	2
GAACTCT	72290	20.4156	9
TCGCGTA	10480	20.145641	2