EGAF00004828162 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828162
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21506932
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	64811	0.301349350990648	No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA	37956	0.1764826335992507	No Hit
CTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTA	36144	0.16805744306068388	No Hit
CCCAAATCTTTAAACCGATGAGCAACCTCACTCTTGTGTGCATCTCGACG	33829	0.1572934717048438	No Hit
CTCTTTTGTTGCCTTGGGCTTGTGTTTCACGAGCTCAACAAGTGCAGTTT	33574	0.15610780747342298	No Hit
CTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTT	27658	0.1286003973044598	No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	25110	0.11675305431755678	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	23822	0.11076428753296844	No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG	23068	0.10725844113888489	No Hit
CTCTTATTCTCATGGTAGGCTGAGATGCTTTTAAATGTGATGTTATAAGC	22053	0.10253903253146474	No Hit
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT	21669	0.10075356168885456	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCGA	8180	40.425552	4
CCCGTAT	9470	37.21002	1
TATCGAA	10220	33.058372	5
CGTATCG	12675	32.867844	3
CCCGTCG	4635	29.495428	1
TGTCGAG	2850	27.47422	5
ACGACTT	4035	26.634014	1
ACCCGGG	53505	26.16329	145
AACGGTT	22050	25.742886	6
CTTAACG	22385	25.678835	3
GAACTCT	59485	25.531338	9
TCTTAAC	23690	24.325552	2
TAACGGT	24035	24.10178	5
CCTCTTG	57020	23.942463	3
TTAACGG	24320	23.735258	4
TTGAACT	66305	23.649082	7
GTCGAGG	3435	23.21507	6
CTTGAAC	64995	23.16651	6
CTCTTGA	61985	22.731632	4
TCTTGAA	65550	22.419582	5