EGAF00004828167 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004828167
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19366109
Sequences flagged as poor quality	0
Sequence length	151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCA	72601	0.3748868706666889	No Hit
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT	61256	0.31630514937202925	No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT	49774	0.2570160066743402	No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC	38525	0.19892999672778874	No Hit
CTTCTGTCAACCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTAT	34631	0.17882270517015061	No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG	29463	0.1521369109303268	No Hit
CACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTT	28879	0.14912133356266868	No Hit
GACAAATCAAGAAACAAACTGCACTTGTTGAGCTCGTGAAACACAAGCCC	26837	0.13857714009561756	No Hit
CCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTT	26430	0.1364755305260339	No Hit
CAAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGA	25618	0.13228263870661885	No Hit
CACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCT	25060	0.12940131649574005	No Hit
CGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAAC	22989	0.11870737689228124	No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC	22020	0.11370379047231428	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	21410	0.11055395794787688	No Hit
ATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGA	21300	0.10998595536150292	No Hit
GTCAACCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCC	19861	0.10255544879975631	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTAAC	17580	64.79495	1
AACACGT	21470	52.94331	5
TAACACG	21420	52.796143	4
ACGTGCG	21605	52.442688	8
ACACGTG	22365	50.888012	6
CGTGCGC	23490	48.38913	9
TCTAACA	24420	46.494213	2
AGTCTAA	13380	46.43103	3
CACGTGC	25215	45.07828	7
GAGTCTA	14140	44.432297	2
ACCGTTG	3170	41.619392	3
GGAGTCT	16035	40.235153	1
CAACCGT	3665	38.47665	1
GTAGGTC	5135	37.01614	2
CCGTTGA	3750	35.18335	4
GTCAACC	17065	32.7941	6
CTAACAC	34955	32.497	3
CATTCGG	4490	31.483667	4
AGACGTG	16395	30.99586	4
CCGTATG	5655	30.253557	4